Department of Microbiology and Molecular Biology, College of Bioscience and Biotechnology, Chungnam National University, Daejeon, 34134, Republic of Korea.
Food Microbiology Division, National Institute of Food and Drug Safety Evaluation, Ministry of Food and Drug Safety, Cheongju, 28159, Republic of Korea.
J Microbiol. 2019 May;57(5):356-361. doi: 10.1007/s12275-019-8512-1. Epub 2019 Feb 22.
A Gram-stain-negative, mucus-forming, motile by gliding, non-spore-forming and short rod-shaped bacterial strain designated R1-15 was isolated from soil and its taxonomic position was evaluated using a polyphasic approach. Strain R1-15 grew at 15-37°C (optimum, 30°C), at pH 6-7 (optimum, pH 6) and in the presence of 0-1% (w/v) NaCl (optimum, 0%) on 0.1X TSA. On the basis of 16S rRNA gene sequence similarity, the novel strain was assigned to the family Chitinophagaceae of the phylum Bacteroidetes, and its closest related taxa were species of the genera Taibaiella (88.76-90.02% sequence similarity), Lacibacter (89.24-90.00%), Chitinophaga (88.61-89.76%), and Terrimonas (89.04%). Flexirubin- type pigments were produced. The only isoprenoid quinone was MK-7, and the major polar lipid was phosphatidylethanolamine. Based on whole genome comparisons between the strain R1-15 and the type strains of relatives, the orthologous average nucleotide identity values were 66.9-67.0%. The DNA G + C content of strain R1-15 was 43.8 mol%. The combination of phylogenetic, chemotaxonomic and phenotypic data clearly supported separation of strain R1-15 from related taxa, and thus the name Mucibacter soli gen. nov., sp. nov. is proposed. The type strain is R1-15 (= KCTC 62274 = JCM 31190).
一株革兰氏阴性、黏液形成、滑行运动、不产芽孢的短杆状细菌菌株 R1-15 从土壤中分离得到,采用多相分类法评估其分类地位。R1-15 菌株在 15-37°C(最适温度 30°C)、pH6-7(最适 pH6)和 0-1%(w/v)NaCl(最适 0%)的 0.1X TSA 上生长。基于 16S rRNA 基因序列相似性,该新菌株被归入拟杆菌门的噬几丁质菌科,与其最接近的分类群是属 Taibaiella(88.76-90.02%序列相似性)、Lacibacter(89.24-90.00%)、噬几丁质菌属(88.61-89.76%)和 Terrimonas(89.04%)。该菌株产生 Flexirubin 型色素。唯一的异戊烯醌是 MK-7,主要极性脂是磷脂酰乙醇胺。基于菌株 R1-15 与亲缘关系的模式菌株之间的全基因组比较,同源平均核苷酸同一性值为 66.9-67.0%。R1-15 菌株的 DNA G+C 含量为 43.8 mol%。菌株 R1-15 与相关分类群的系统发育、化学分类和表型数据的综合分析清楚地支持了它与亲缘关系菌株的分离,因此提议建立一个新属和新种,即 Mucibacter soli 属,种 nov.。模式菌株为 R1-15(=KCTC 62274=JCM 31190)。