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本文引用的文献

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A quantitative inventory of yeast P body proteins reveals principles of composition and specificity.酵母 P 体蛋白的定量目录揭示了组成和特异性的原则。
Elife. 2020 Jun 19;9:e56525. doi: 10.7554/eLife.56525.
2
G3BP1 Is a Tunable Switch that Triggers Phase Separation to Assemble Stress Granules.G3BP1 是一个可调开关,可触发液-液相分离以组装应激颗粒。
Cell. 2020 Apr 16;181(2):325-345.e28. doi: 10.1016/j.cell.2020.03.046.
3
Rigidity enhances a magic-number effect in polymer phase separation.刚性增强了聚合物相分离中的幻数效应。
Nat Commun. 2020 Mar 25;11(1):1561. doi: 10.1038/s41467-020-15395-6.
4
Physical Principles Underlying the Complex Biology of Intracellular Phase Transitions.细胞内相转变的复杂生物学的物理原理。
Annu Rev Biophys. 2020 May 6;49:107-133. doi: 10.1146/annurev-biophys-121219-081629. Epub 2020 Jan 31.
5
Protein Network Structure Enables Switching between Liquid and Gel States.蛋白质网络结构可实现液体和凝胶状态之间的转换。
J Am Chem Soc. 2020 Jan 15;142(2):874-883. doi: 10.1021/jacs.9b10066. Epub 2020 Jan 3.
6
Regulation of Transmembrane Signaling by Phase Separation.液-液相分离调控跨膜信号转导
Annu Rev Biophys. 2019 May 6;48:465-494. doi: 10.1146/annurev-biophys-052118-115534. Epub 2019 Apr 5.
7
Cancer Mutations of the Tumor Suppressor SPOP Disrupt the Formation of Active, Phase-Separated Compartments.肿瘤抑制因子 SPOP 的癌症突变破坏了活性、相分离隔间的形成。
Mol Cell. 2018 Oct 4;72(1):19-36.e8. doi: 10.1016/j.molcel.2018.08.027. Epub 2018 Sep 20.
8
A Molecular Grammar Governing the Driving Forces for Phase Separation of Prion-like RNA Binding Proteins.一种分子语法,用于控制朊病毒样 RNA 结合蛋白相分离的驱动力。
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9
The physiological and pathological biophysics of phase separation and gelation of RNA binding proteins in amyotrophic lateral sclerosis and fronto-temporal lobar degeneration.肌萎缩侧索硬化症和额颞叶痴呆中RNA结合蛋白相分离和凝胶化的生理与病理生物物理学
Brain Res. 2018 Aug 15;1693(Pt A):11-23. doi: 10.1016/j.brainres.2018.04.036. Epub 2018 Apr 30.
10
Protein Phase Separation: A New Phase in Cell Biology.蛋白质液-液相分离:细胞生物学的一个新领域。
Trends Cell Biol. 2018 Jun;28(6):420-435. doi: 10.1016/j.tcb.2018.02.004. Epub 2018 Mar 27.

无序凝聚体的结构-功能特性。

Structure-Function Properties in Disordered Condensates.

机构信息

Department of Physics, Kansas State University, Manhattan, Kansas 66506, United States.

Department of Biophysics, UT Southwestern Medical Center, Dallas, Texas 75390, United States.

出版信息

J Phys Chem B. 2021 Jan 14;125(1):467-476. doi: 10.1021/acs.jpcb.0c11057. Epub 2021 Jan 4.

DOI:10.1021/acs.jpcb.0c11057
PMID:33395293
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8194388/
Abstract

Biomolecular condensates appear throughout the cell serving a wide variety of functions. Many condensates appear to form by the assembly of multivalent molecules, which produce phase-separated networks with liquidlike properties. These networks then recruit client molecules, with the total composition providing functionality. Here we use a model system of poly-SUMO and poly-SIM proteins to understand client-network interactions and find that the structure of the network plays a strong role in defining client recruitment and thus functionality. The basic unit of assembly in this system is a zipperlike filament composed of alternating poly-SUMO and poly-SIM molecules. These filaments have defects of unsatisfied bonds that allow for both the formation of a 3D network and the recruitment of clients. The filamentous structure constrains the scaffold stoichiometries and the distribution of client recruitment sites that the network can accommodate. This results in a nonmonotonic client binding response that can be tuned independently by the client valence and binding energy. These results show how the interactions within liquid states can be disordered yet still contain structural features that provide functionality to the condensate.

摘要

生物分子凝聚体遍布细胞,发挥着各种各样的功能。许多凝聚体似乎是通过多价分子的组装形成的,这些分子形成具有液态特性的相分离网络。然后,这些网络招募客户分子,其总组成提供功能。在这里,我们使用聚 SUMO 和聚 SIM 蛋白的模型系统来了解客户网络的相互作用,并发现网络的结构在定义客户招募以及因此的功能方面起着重要作用。该系统中组装的基本单元是由交替的聚 SUMO 和聚 SIM 分子组成的拉链状细丝。这些纤维存在未满足的键缺陷,允许形成 3D 网络并招募客户。丝状结构限制了支架的化学计量比和网络可以容纳的客户招募位点的分布。这导致客户结合响应呈非单调变化,可通过客户价态和结合能独立调节。这些结果表明,液体状态中的相互作用如何可以是无序的,但仍然包含为凝聚体提供功能的结构特征。