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废水中低成本病毒浓缩方法的评估:对严重急性呼吸综合征冠状病毒2大流行监测的意义。

Evaluation of low-cost viral concentration methods in wastewaters: Implications for SARS-CoV-2 pandemic surveillances.

作者信息

Salvo Matías, Moller Ana, Alvareda Elena, Gamazo Pablo, Colina Rodney, Victoria Matías

机构信息

Laboratory of Molecular Virology, CENUR Litoral Norte, Universidad de la República, Gral. Rivera 1350, Salto CP: 50.000, Uruguay; Water Department, CENUR Litoral Norte, Universidad de la República, Gral. Rivera 1350, Salto CP: 50.000, Uruguay.

Laboratory of Molecular Virology, CENUR Litoral Norte, Universidad de la República, Gral. Rivera 1350, Salto CP: 50.000, Uruguay.

出版信息

J Virol Methods. 2021 Nov;297:114249. doi: 10.1016/j.jviromet.2021.114249. Epub 2021 Jul 31.

Abstract

In the pandemic of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) many strategies have been performed in order to control viral spread in the population and known the real-time situation about the number of infected persons. In this sense, Wastewater Based Epidemiology (WBE) has been applied as an excellent tool to evaluate the virus circulation in a population. In order to obtain reliable results, three low-cost viral concentration methods were evaluated in this study, polyethylene glycol (PEG) precipitation, skimmed milk flocculation (SM) and Aluminum polychloride flocculation, for Pseudomonas aeruginosa bacteriophage PP7 as a surrogate for non-enveloped viruses and Bovine Coronavirus (BCoV) as a surrogate for enveloped virus, with emphasis for SARS- CoV-2. Our results suggest that PEG precipitation for viral concentration, for both enveloped and non-enveloped virus from wastewater is an appropriate approach since it was more sensitive compared to SM flocculation and Aluminum polychloride flocculation. This methodology can be used for WBE studies in order to follow the epidemiology of the SARS-CoV-2 pandemic, mainly in developing countries where the economic resources are frequently limited.

摘要

在严重急性呼吸综合征冠状病毒2(SARS-CoV-2)大流行期间,人们采取了许多策略来控制病毒在人群中的传播,并了解感染者数量的实时情况。从这个意义上讲,基于污水的流行病学(WBE)已被用作评估病毒在人群中传播情况的一种出色工具。为了获得可靠的结果,本研究评估了三种低成本病毒浓缩方法,即聚乙二醇(PEG)沉淀法、脱脂牛奶絮凝法(SM)和聚合氯化铝絮凝法,以铜绿假单胞菌噬菌体PP7作为非包膜病毒的替代物,牛冠状病毒(BCoV)作为包膜病毒的替代物,重点是SARS-CoV-2。我们的结果表明,对于废水中包膜和非包膜病毒的浓缩,PEG沉淀法是一种合适的方法,因为与SM絮凝法和聚合氯化铝絮凝法相比,它更灵敏。这种方法可用于WBE研究,以跟踪SARS-CoV-2大流行的流行病学情况,主要用于经济资源经常有限的发展中国家。

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