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用于重症监护病房有创机械通气患者拔管失败风险动态预测的可解释递归神经网络模型

Interpretable recurrent neural network models for dynamic prediction of the extubation failure risk in patients with invasive mechanical ventilation in the intensive care unit.

作者信息

Zeng Zhixuan, Tang Xianming, Liu Yang, He Zhengkun, Gong Xun

机构信息

Department of Emergency Medicine, The Second Xiangya Hospital of Central South University, Changsha, China.

Department of Rehabilitation, The Second Xiangya Hospital of Central South University, Changsha, China.

出版信息

BioData Min. 2022 Sep 27;15(1):21. doi: 10.1186/s13040-022-00309-7.

DOI:10.1186/s13040-022-00309-7
PMID:36163063
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9513908/
Abstract

BACKGROUND

Clinical decision of extubation is a challenge in the treatment of patient with invasive mechanical ventilation (IMV), since existing extubation protocols are not capable of precisely predicting extubation failure (EF). This study aims to develop and validate interpretable recurrent neural network (RNN) models for dynamically predicting EF risk.

METHODS

A retrospective cohort study was conducted on IMV patients from the Medical Information Mart for Intensive Care IV (MIMIC-IV) database. Time series with a 4-h resolution were built for all included patients. Two types of RNN models, the long short-term memory (LSTM) and the gated recurrent unit (GRU), were developed. A stepwise logistic regression model was used to select key features for developing light-version RNN models. The RNN models were compared to other five non-temporal machine learning models. The Shapley additive explanations (SHAP) value was applied to explain the influence of the features on model prediction.

RESULTS

Of 8,599 included patients, 2,609 had EF (30.3%). The area under receiver operating characteristic curve (AUROC) of LSTM and GRU showed no statistical difference on the test set (0.828 vs. 0.829). The light-version RNN models based on the 26 features selected out of a total of 89 features showed comparable performance as their corresponding full-version models. Among the non-temporal models, only the random forest (RF) (AUROC: 0.820) and the extreme gradient boosting (XGB) model (AUROC: 0.823) were comparable to the RNN models, but their calibration was deviated.

CONCLUSIONS

The RNN models have excellent predictive performance for predicting EF risk and have potential to become real-time assistant decision-making systems for extubation.

摘要

背景

对于有创机械通气(IMV)患者的治疗,拔管的临床决策是一项挑战,因为现有的拔管方案无法精确预测拔管失败(EF)。本研究旨在开发并验证可解释的循环神经网络(RNN)模型,用于动态预测EF风险。

方法

对重症监护医学信息集市IV(MIMIC-IV)数据库中的IMV患者进行回顾性队列研究。为所有纳入患者构建了分辨率为4小时的时间序列。开发了两种类型的RNN模型,即长短期记忆(LSTM)模型和门控循环单元(GRU)模型。使用逐步逻辑回归模型选择关键特征,以开发轻量级RNN模型。将RNN模型与其他五个非时间机器学习模型进行比较。应用Shapley加法解释(SHAP)值来解释特征对模型预测的影响。

结果

在8599例纳入患者中,2609例发生EF(30.3%)。LSTM和GRU在测试集上的受试者操作特征曲线下面积(AUROC)无统计学差异(0.828对0.829)。基于从总共89个特征中选出的26个特征构建的轻量级RNN模型,其性能与其相应的完整版本模型相当。在非时间模型中,只有随机森林(RF)(AUROC:0.820)和极端梯度提升(XGB)模型(AUROC:0.823)与RNN模型相当,但它们的校准存在偏差。

结论

RNN模型在预测EF风险方面具有出色的预测性能,有潜力成为拔管的实时辅助决策系统。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1336/9513908/a122ada415d0/13040_2022_309_Fig7_HTML.jpg
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